Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAEITKAKNLGEWLDMRLGTNNLV-KVLMTEYWIPKNINFLWAMGVILLTLLGVLVISGIFLLMYYKPDAKMAFDSVNFTIMQEVAYGWLWRHMHATAASMIFVIIYIHMFVGIYYGSYKKGREMIWISGMILFVVFSAEAFSGYMLPWGQMSYWAAAVITNLFGGIPFIGADVVEWIRGNYVVADSTLTRFFMLHVFLLPIAIILLVGVHFYSLRILHVNNQEGEEIDFELEEKKFIEGKKKESKVIPFWPVFLSKDIFVVCTFMVFFFYLVCYQYDFAMDPINFERGNSLKTPPHIYPEWYFLWSYEVLRGFFFSADL------GLMAFGVAQVIFF-------------LLPFLDRSPVVAPAHKRPAFMVWFWLLIIDMIVLTIYGKLPPLGIGKYIGLFGSITFLALFFVVLPIITIAERKKQGGVR |
2QJK Chain:A ((15-415)) | -----------KWLHSRLPIVALAYDTIMIP--TPRNLNWMWIWGVVLAFCLVLQIVTGIVLAMHYTPHVDLAFASVEH-IMRNVNGGFMLRYLHANGASLFFIAVYLHIFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVITGLFGAIPGIGHSIQTWLLGGPAVDNATLNRFFSLH-YLLPFVIAALVAIHIWAFHSTGNNNPTGVEV-------RRTSKAEAQKDTVPFWPYFIIKDVFALAVVLLVFFAIVGFMPNYLGHPDNYIEANPLRTPAHIVPEWYFLPFYAILRA--FTADVWVVQIANFISFGIIDAKFFGVLAMFGAILVMALVPWLDTSPVRS-GRYRPMFKIYFWLLAADFVILTWVGAQQTTFPYDWISLIASAYWFAYFLVILPILGAIEKPVAPPAT |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QJK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -315615 for 2818 contacts (-112.0/contact) +
2D Compatibility (PS) -38597 + (NN) -16061 + (LL) 2132
1D Compatibility (HY) -45600 + (ID) 7900
Total energy: -421641.0 ( -149.62 by residue)
QMean score : 0.298
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