Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVIKDAHFLTSSNNLSQCPASLTSEMVILGRSNVGKSTFINTLLGKNLAKSSATPGKTRLANFFSTTWEDKENALTTTFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLIDARHLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINTIHFNALSSKYPTLEIVRQTLLKYLLTNPL
3PR1 Chain:A ((2-153))
--IIRDVELVKVARTPGDYPPPLKGEVAFVGRSNVGKSSLLNALFN-------------RSINFY---------LVNSKYYFVDLPGY-------KERMLWKRLVEDYFKNRWSLQMVFLLVDGRIPPQDSDLMMVEWMKSLNIP---FTIVLTKMDKVKMSERAKKLEEHRKVFSKYGEYTIIPTSSVTGEGISELLDLISTLLK--
General information:
TITO was launched using:
RESULT:
Template:
3PR1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81277 for 893 contacts (-91.0/contact) +
2D Compatibility (PS) -13812 + (NN) -2245 + (LL) 1924
1D Compatibility (HY) -12000 + (ID) 1850
Total energy: -109260.0 ( -122.35 by residue)
QMean score : 0.371
(partial model without unconserved sides chains):
PDB file :
Tito_3PR1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PR1-query.scw
PDB file :
Tito_Scwrl_3PR1.pdb
: