Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMILSIESSCDDSSLALTRIEDAKLIAHFKISQEKHHSSYGGVVPEIASRLHA-ENLPLLLERVKIS--LNKDFSKIKAIAITNQPGLSVTLIEGLMMAKALSLSLNLPLILEDHLRGHVYSLFINEKQTRMPLSVLLVSGGHSLILEARDYEDIKIVATSLDDSFGESFDKVSKMLDLGYPGGPIVEKLALDYAHPNEPLMFPIPLKNSPNLAFSFSGLKNAVRLEVEKNAHNLNDEVKQKIGYHFQSAAIEHLIQQTKRYFKIKRPKIFGIVGGASQNLALRKAFEDLCAEFDCELVLAPLEFCSDNAAMIGRSSLEAYQKKRFIPLEKADISPRTLLKNFE
4YDU Chain:A ((3-314))-VLGIETSCDETGIAIYDDEKG-LLANQLYSQVKLHADYGGVVPELASRDHVRKTVPLIQAALKESGLTAKD---IDAVAYTAGPGLVGALLVGATVGRSLAFAWDVPAIPVHHMEGHLLAPMLEDNPPEFPFVALLVSGGHTQLISVTGIGQYELLGESIDDAAGEAFDKTAKLLGLDYPGGPLLSKMAAQGTAGR--FVFPRPMTDRPGLDFSFSGLKTFAANTIRDN--GTDDQTRADIARAFEDAVVDTLMIKCKRALDQTGFKRLVMAGGVSANRTLRAKLAEMMKKRRGEVFYARPEFCTDNGAMIAYAGMVRFKAGATADLGVSVRPRWPLAELPA


General information:
TITO was launched using:
RESULT:

Template: 4YDU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -181265 for 2780 contacts (-65.2/contact) +
2D Compatibility (PS) -33536 + (NN) -17379 + (LL) 592
1D Compatibility (HY) -20800 + (ID) 5450
Total energy: -257838.0 ( -92.75 by residue)
QMean score : 0.482

(partial model without unconserved sides chains):
PDB file : Tito_4YDU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YDU-query.scw
PDB file : Tito_Scwrl_4YDU.pdb: