Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LATGIGTAKMILCGEHAVVYGEPAISVPF---TQAVVTTNVETSIKTKFSSAFFSGDLDDMPDFLAGIKALVVDVLNEIG-NGECVSIHVVSGVPIGRGLGSSAAVATSIARGLYKYFNQELDSKKLLAIVNAAEKIAHGNASGVDAITVVSEKPVWYERDRKLEIMHFPKKITFVVADTGVPSETRDAVKDVQVLYKENQVEIGKIIHQLGDISREIKTHLEGDADTVKIGAAMNKAQSYLETLTVSDSSLEKLIKVARSNGADGAKLTGGGRGGCIIAVAKNQEIAEQITKALHNAGAAQEWIFTIGEGSYESDSHRTHECGAN |
| 4HAC Chain:B ((29-305)) | --------KIYLFGEHAVVYGETAIACAVELRTRVRAELNDSITIQSQIGRTGL--DFEKHPY----VSAVIEKMRKSIPING--VFLTVDSDIPVGSGLGSSAAVTIASIGALNELFGFGLSLQEIAKLGHEIEIKVQGAASPTDTYVSTFGGVVTIPERRKLKT----PDCGIVIGDTGVFSSTKELVANVRQLRESYPDLIEPLMTSIGKISR-IGEQLVLSGDYASIGRLMNVNQGLLDALGVNILELSQLIYSARAAGAFGAKITGAGGGGCMVALTAPEK-CNQVAEAVAGAG--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HAC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114376 for 2335 contacts (-49.0/contact) +
2D Compatibility (PS) -29647 + (NN) -14887 + (LL) 2568
1D Compatibility (HY) -17600 + (ID) 4700
Total energy: -178642.0 ( -76.51 by residue)
QMean score : 0.540
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