Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGTFFSKWGKWILVLGLVFSVFSVSTAGQAAAKETVINKQMVTTASLNVRSTNSTSGKVIGWLKNNTKFKAIAKTSNNWYRFSFKGKNGYVSGKYVKAATATPTPKPPTPKIVQMNVPLIVQRPQLPTGCEITNIAMMLRYAGKNVDKVKLAKEMKRHKSNPNYGFVGNPFSKSGWTIYPPALVNQVKKYTGSAKNMTGTNLAGIKNQLNKKRPVVAWVSKFHGFSVHAITITGYDKNNFYYNDSWSGQKNARISQSYFNTCWSKQAKRAISY |
| 2KRS Chain:A ((9-59)) | --------------------------------------------SALNMRSGPGSNYGVIGTLRNNDKVEII-KEVDGWYEIRFNGKVGYASKSYI--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KRS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10825 for 296 contacts (-36.6/contact) +
2D Compatibility (PS) -5473 + (NN) -1029 + (LL) 13396
1D Compatibility (HY) -4800 + (ID) 1100
Total energy: -9831.0 ( -33.21 by residue)
QMean score : 0.444
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