Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LEKY-LICSDLDGTLLLKNQTISPKTLNLLQQLIEEGHHFAVSTGRMYNSATDFA---KLVHPKADVIASNGGVVAVSGEIIQQEKMKQSALLETFLLCQNHDLPVFFFSTDTVFYTKNPPYYFTDEEDKGRVNATKLVAIKSREIFLEHA-------DQFINGIVIEEE------------------DFDKLAVLRSDL--EKLSDVSILSSHANNIEILPKDMDKKYAVKNLAAHLNIKPENVITFGDGENDIGMLEVAGAGVAMENASELVKKSADFVTTANDADGIYYFLKKHLNR |
| 4DW8 Chain:A ((4-269)) | --KYKLIVLDLDGTLTNSKKEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGG------EIINWES--KEMMYENVL--PNEVVPVLY--------------------ECARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVAKCLIVGDAGKLIPVESELCIRLQGKINVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAADYITLTNDEDGVAEAIERIF-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DW8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71593 for 1934 contacts (-37.0/contact) +
2D Compatibility (PS) -25512 + (NN) -13000 + (LL) 2128
1D Compatibility (HY) -18400 + (ID) 3900
Total energy: -130277.0 ( -67.36 by residue)
QMean score : 0.388
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