Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LDIQESVIGIDLGGTKILIGEVTKDGEVLNSKSYPSNTENQTKATETLLKVLADYTQNIGFIAPKQTGIGVGLVGRVDHKSGVWLEIEPGKSNPTPLAGILEAKTGLPVSLGNDVVCATMAEKQFGWGRETND---FIYLNVGTGLAAGFVVDGRITQGGHFNAGEVGHAVVDI--------HSDVL-CGCGRRGCVERLASGLGIKEEALRHLNSYPTSILAETQTELTGKMVLHAAEQKDELAEKIIDNATFQLANLIMNLVRTTDPECVILGGGVTRNEHFFQKIQDNLQSNTIRFVTKGVVRSKLEKDKVGLIGAAVIGMRLGNEGGKE |
| 4DB3 Chain:A ((28-326)) | --------GFDVGGTKIEFGAFNEKLERVATERVPTPTDDYPLLLETIAGLVAKYDQEFAC----EGKIGLGLPGMEDADDATVLTVNVPAAKGKPLRADLEAKIGRSVKIENDANCFALSE---AWDEELQDAPSVMGLILGTGFGGGLIYEGKVFSGRNNVAGELGHMRLPLDAWFHLGDNAPLLGCGCGKKGCLDSYLSGRGFE---LLYAHYY-----GEEKKAID---IIKANAAGDEKAAEHVERFMELLAICFGNIFTANDPHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLNIK-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DB3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111106 for 2390 contacts (-46.5/contact) +
2D Compatibility (PS) -31288 + (NN) -19477 + (LL) 2052
1D Compatibility (HY) -18800 + (ID) 4150
Total energy: -182769.0 ( -76.47 by residue)
QMean score : 0.427
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