Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKPTMMTYINEEEEMCRAILANFQTNAEKLESLVKNGAKEWLILATGSSLNAAQSAKYYIENIADVRITVEEPFNHLYYEKLSNHLDLVIGISQSGQSTSTISALERVKKEASVPVVALTSDVTSEIAEFADITLDIGSGKERVGYVTKGFTATVLTLMLTGLHFAYKTAQIDETKFNNEINAFSRATNAIPATIAETEAFYERWQ---EEFATAPKFTAIGYGPTVGTCKEFETKFSETVRVPSQGLDLEAFMHGPYLEVNPQHRIFFLETESAVTERLVA----LRNYESKYTPFT-YTVKFGTAGNDRTLLIPADLDEYQAPFLMILPFQILAHHIAELKGNKLTERIYTDFGVAMKSKTKPGDYA
4AMV Chain:A ((279-598))-------------------LSELGPNADELLSKVEH----IQILACGTSYNSGMVSRYWFESLAGIPCDVEIASEFRYRKSAVRRNSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMTNAGTEIGVASTKAFT-TQLTVLLMLVAKLSKLKGLDASIEHDIVHGL----QALPSRIEQMLSQDKRIEALAEDFSDKHHALFLGRGDQYPIALEGALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVVAPNNELLEKLKSNIEEVRARGGQLYVFADQDAGFVSSDNMHIIEMP-HVEEVIAPIFYTVPLQLLAYHVALIKGTDVDQ--------------------


General information:
TITO was launched using:
RESULT:

Template: 4AMV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -179525 for 2721 contacts (-66.0/contact) +
2D Compatibility (PS) -32681 + (NN) -9110 + (LL) 3632
1D Compatibility (HY) -15200 + (ID) 3750
Total energy: -236634.0 ( -86.97 by residue)
QMean score : 0.465

(partial model without unconserved sides chains):
PDB file : Tito_4AMV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4AMV-query.scw
PDB file : Tito_Scwrl_4AMV.pdb: