Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMNRVVLVGRLTKDPELRYTPAGVAVATFTLAVN-RTFTNQQGER---EADFINCVVWRKPAENVANFLKKGSMAGVDGRVQTRNYEGNDGKRVYVTEIVAESVQFLEPRNSNGGGGNNYQSGNNNNNYNSGGNNFGQAPTNNGGFGQDQQQSQNQNYQSTNNDPFASDGKPIDISDDDLPF
1X3G Chain:A ((7-106))
----ITVVGNLTADPELRFTPSGAAVANFTVASTPRMFDR----WKDGEALFLRCNIWREAAENVAESLTRGSRVIVTGRLKQRSFETREGEKRTVVEVEVDEI------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1X3G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48608 for 568 contacts (-85.6/contact) +
2D Compatibility (PS) -10195 + (NN) -3779 + (LL) -768
1D Compatibility (HY) -5600 + (ID) 2100
Total energy: -71050.0 ( -125.09 by residue)
QMean score : 0.610
(partial model without unconserved sides chains):
PDB file :
Tito_1X3G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X3G-query.scw
PDB file :
Tito_Scwrl_1X3G.pdb
: