Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAGGRRGGRRRKKVCYFTSNGITHIDYKDVELLKKFVSERGKILPRRVTGTSAKYQRKLTVAIKRSRQMALLPFVAEEK
4A2I Chain:R ((20-70))
------------------------IDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRARYLSLLPYT----
General information:
TITO was launched using:
RESULT:
Template:
4A2I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12692 for 297 contacts (-42.7/contact) +
2D Compatibility (PS) -5074 + (NN) 353 + (LL) 1252
1D Compatibility (HY) -5200 + (ID) 1500
Total energy: -22861.0 ( -76.97 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_4A2I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A2I-query.scw
PDB file :
Tito_Scwrl_4A2I.pdb
: