Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNMNKSVGKFLSRKLEEQSMKVADSSMSKACFMFVYEPKSPFVKMQEKNENK
2AHQ Chain:A ((42-61))
----------EIANILKEKGFKVARRTVAK-----------------------
General information:
TITO was launched using:
RESULT:
Template:
2AHQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1789 for 90 contacts (-19.9/contact) +
2D Compatibility (PS) -2022 + (NN) 581 + (LL) 2148
1D Compatibility (HY) -1600 + (ID) 300
Total energy: -2982.0 ( -33.13 by residue)
QMean score : 0.307
(partial model without unconserved sides chains):
PDB file :
Tito_2AHQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AHQ-query.scw
PDB file :
Tito_Scwrl_2AHQ.pdb
: