Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFSILMAIIQITGIFIAIQILTNKVFSIKEGLVTIAIAMLAFPLFTLVQYWSMIFVLIVFVSALYWKNKNVVVSASITLVVIILLTISDSIVGFILVPGLNFKYDEIFNELLPTLIYCAGMLANLLVFSFLLRKLIEKVNISRFVEHRKYAYIIFSIVALTVLAFYMNIYAGSIAGFDGSVLKINTLIFTGYTILLIVIVTVVINTATNELKVQNQKEQLEQLQDYVTTLESLHREMRVFRHDYVNILSTLVGYIDNNDMPGLKYYFENNIVPINKTIESNNYKISLLQNIHVIELKGLLAVKLIRAQELKIDAILEVVEPIDKISMDSIDLCKVVGILLDNAVEAALTCENPVIRIAFVKKGDSIIIVFANSLPVNMPPI-----YKIFEEGFSTKGEGRGLGLASLREIMKKYSHVALDTKVTDREVIQELEIM |
3A0W Chain:A ((24-123)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RKMNIDFCFETDNEDLRVEADRTRIKQVLINLVQNAIEA--TGENGKIKITSEDMYTKVRVSVWNS----GPPIPEELKEKIFSPFFTTKTQGTGLGLSICRKIIE----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A0W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55055 for 556 contacts (-99.0/contact) +
2D Compatibility (PS) -10448 + (NN) -3381 + (LL) 33176
1D Compatibility (HY) -4000 + (ID) 1650
Total energy: -41358.0 ( -74.38 by residue)
QMean score : 0.485
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