Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKTIEMDGTTYDFTYEDLVWSITFPKSKTRAKELAQLELLEKPATHFTPAKISSDSDSYTISYEIAPRTYGFEQVRKMGREDKLRALRNIADLGELLNTRYTFFLHPDNLIFDINLVPSIVHRGIKNILPPYELTEETFFKQYQCFVIAMFSKKFSFENLYNGSLSGARGTQFEKSILDAKTVQDIATILEEAYMKEHAAVQKNMASVPKKKYSTFRGLAVGFIIVAILLAIPVSYFAFVKVPLQNDLLTANENFLKTDYDKVITGLENVDPEKMPQSV----QYELAYSY-----VKGEKMSDKKKEN--------IMNTISLKSDAKNLLYWIYNGRGEFSKSLDIAKLLDDPTLAMYSLTKQIEQVQSDTTLSGDEKVEKLKTLEESLKEYDEKVNESTTTEDETTNTEAK |
4EQB Chain:A ((60-192)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IAIPSEYM--INKMKDEDLL------VPLDYSK-IEGIENIGPEFLNQSFDPGNKFSIPYFWGTLGIVYNETMVDEAPEHWDDLWKLEYKNSIMLFDGAREVLGLGLNSLGYSLNSKD-PQQLEETVDKLYKLTPNIKAIVAD------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EQB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25126 for 571 contacts (-44.0/contact) +
2D Compatibility (PS) -11768 + (NN) -1423 + (LL) 20816
1D Compatibility (HY) -9200 + (ID) 1950
Total energy: -28651.0 ( -50.18 by residue)
QMean score : 0.301
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