Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGNVKIDAAKVAEAKKSAAIVEKSLESTHKKCKSVISYVEGASWSGKSRDAFLTFMELIEKYHADVKKNYKKQKKALTALEDYVEDFENTSYSKDVKRL
3TTN Chain:A ((163-206))
--------------------------------------------------AALNYLGLDPNTHD--PKDYKKAEEVLTKVRPYVSYFHSSKYISDL---
General information:
TITO was launched using:
RESULT:
Template:
3TTN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1683 for 208 contacts (8.1/contact) +
2D Compatibility (PS) -4364 + (NN) 749 + (LL) 3940
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -2342.0 ( -11.26 by residue)
QMean score : 0.379
(partial model without unconserved sides chains):
PDB file :
Tito_3TTN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TTN-query.scw
PDB file :
Tito_Scwrl_3TTN.pdb
: