Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQQTMGGAGAASTIDINPDEMTHIAKELLAIANEFEGVIKPAVNQLKANKYLTKGKAKKAM-DKVPKANERVMELQDQYNMASSVVFDILQTMVDADRDIAEKIIAALEV
3FAV Chain:A ((12-85))
---------------------LAQEAGNFERISGDLKTQIDQVESTAGSLQGQWRGAAGTAAQAAVVRFQEAANKQKQELDEISTNIRQAGVQYS----------------
General information:
TITO was launched using:
RESULT:
Template:
3FAV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14212 for 366 contacts (-38.8/contact) +
2D Compatibility (PS) -7984 + (NN) -3866 + (LL) 2632
1D Compatibility (HY) 3200 + (ID) 450
Total energy: -20680.0 ( -56.50 by residue)
QMean score : 0.525
(partial model without unconserved sides chains):
PDB file :
Tito_3FAV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FAV-query.scw
PDB file :
Tito_Scwrl_3FAV.pdb
: