Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRGQEEIDKEQYQVLFIKERLIPCVLGAVIGDCLGVPVEFKDREYLKQ-----NPIVEMIGYGTYNQPKGTWSDDSSLTFALMESLIS-GYDINRIVNNMVSFMDDGFWTPYGEVFDIGSVTRESLNRYKN----GVSVFECGGKDNFDNGNGAIMRIMPLVFYLGKDFSFGKKNKITEEV---TRITHAHPRSILGSYVYIELLQNLFANMDKKLAYEEMQNYIRKNYSDYPFKD-ELQYYNNILEGNLYELKESNIKSSGYVVDTLEASIWAFLTTNSYKEAVLKAVNLGGDTDTIAFITGSLAGIYYKMEQIPVNWIDQIAKKEDILNLCNRFIESLIKQ |
| 1T5J Chain:A ((6-297)) | ----------------MRDKILGSVFGAVIGDALGMPTENLTKEEIKKLYGFVDSYVEPKNYLAGKLNKGEWTDDTEQAICLIKSLTKEGIDIKKFANCLIAWKNKN--PP-----DIGLTSLMAIDKLENNDYSGVDSSSCG----------AAMRIYPLGIVFHNNLK-----KLKEEVIKASKITHNNKTAIAGALAIAFFVSSALKDRKDFSLLDECYNYIKDIDEEFAKKLLEIKNFNNL--DYIYDYFGTGVKTD----EVVPSAIATYLLTDNFKEGMLKCINAGGDTDSLASMYGAMAGAYYGFKNIPKEWIDGLKNKEVIFELAERL------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1T5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -161567 for 2625 contacts (-61.5/contact) +
2D Compatibility (PS) -29162 + (NN) -2897 + (LL) 2952
1D Compatibility (HY) -19200 + (ID) 4550
Total energy: -214424.0 ( -81.69 by residue)
QMean score : 0.455
|
|
|