Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVTSNINSELADGFQGYTDVRKITVNSTVDVGVSGSLTAVLGQVGSSFGLPGAIGGLGVGLVLDTILSLNGTKDTWKNSINEKMQDLEDWFRVEAK
2J68 Chain:A ((543-584))
-------------------DWKNILLNYFTVIGIGGIITAVTGILLGPIGF--ALLGLGVGFL----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2J68.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6276 for 176 contacts (-35.7/contact) +
2D Compatibility (PS) -3736 + (NN) 5191 + (LL) 2852
1D Compatibility (HY) -5200 + (ID) 800
Total energy: -7969.0 ( -45.28 by residue)
QMean score : -0.063
(partial model without unconserved sides chains):
PDB file :
Tito_2J68.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2J68-query.scw
PDB file :
Tito_Scwrl_2J68.pdb
: