Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VKKNLEQIYAIEFTMGLRYRPMQIRHNIKLIFLLLLFVTWLQGDFMNRLPGNLDITKVDMPLVLLALLCYIILYPQKMTIRFQNLQYLLYICCFQFLVFMVIRYFYSNLIYGIQNMVSLTAQTLVASYVFLLVLWILALIFFYFHFRKKLRNGDYRKDSELQKKRSNL-GLKLSKGSYILIGAFFVFILSSQIVGGIMVDIMIISIEIVGIALCSMGIVIFPEQLFTAYCKFKFKEFHIEE |
3HD7 Chain:A ((51-76)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------QFETSAAKLKRKYWWKNLKMMIILGV-------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HD7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5703 for 86 contacts (66.3/contact) +
2D Compatibility (PS) -2619 + (NN) -1426 + (LL) 22656
1D Compatibility (HY) -1200 + (ID) 150
Total energy: 22964.0 ( 267.02 by residue)
QMean score : 0.466
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