Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VKLPPEADYLNDETLEVYENDKKKYDQTNQLITNNSVTILLGDFCYYESAWSSRWRDNRFWIGSKVS
4X63 Chain:A ((320-349))
--LQPLMDNLESQTYEVFEKDPIKYSQYQQAI-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4X63.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3556 for 112 contacts (31.8/contact) +
2D Compatibility (PS) -3050 + (NN) -1138 + (LL) 2184
1D Compatibility (HY) -2000 + (ID) 700
Total energy: -1148.0 ( -10.25 by residue)
QMean score : 0.525
(partial model without unconserved sides chains):
PDB file :
Tito_4X63.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4X63-query.scw
PDB file :
Tito_Scwrl_4X63.pdb
: