Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLKQLTNQLFTSTIFLVTMLFIIPPT-FAIADGSKVSFYEYIYGAPLRWLTVISTTEKKGAFLEMFFSENEGINIQWLNLIINFLLVFLVITIIFSLAKKFYNKKNA
1EGG Chain:A ((71-117))
---------------LFWLGLTYG----GFTWSDGSPVSYENWAYGEPNNYQNVEYCGELKG-----------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1EGG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9398 for 154 contacts (-61.0/contact) +
2D Compatibility (PS) -4072 + (NN) 3013 + (LL) 6212
1D Compatibility (HY) -2800 + (ID) 700
Total energy: -7745.0 ( -50.29 by residue)
QMean score : -0.214
(partial model without unconserved sides chains):
PDB file :
Tito_1EGG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EGG-query.scw
PDB file :
Tito_Scwrl_1EGG.pdb
: