Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTSEFFSTLLLIIGLLIGFFLAILLILAGIRRFFCSAEEPLKRIRRYQVWHNRYQFNEEVTSFFTVIGATLLVSLITVQITAIPFQYTVLIFWSSWLFHLLSFWKKIRVPKKMKNEMIQLAGFLLITALYFVGYFAMKSLHFSIIHVADFPGVIQFGIRTYLTICSLFVASGALIVWQRIYVKLLK |
3EWL Chain:A ((25-41)) | -------------------------------------------------------------------------------------QYTMLFFYDPDCSNCRK------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EWL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5809 for 43 contacts (-135.1/contact) +
2D Compatibility (PS) -1700 + (NN) 138 + (LL) 17264
1D Compatibility (HY) -400 + (ID) 150
Total energy: 9343.0 ( 217.28 by residue)
QMean score : -0.327
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