Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTFLEFHQLVKEDLLIYSWIIKNFHLTRQKLMAGGEITMNR---EQVIVMEKGLLVQVN--EEGKNDLYRVFIDQRIIFTT----K---GDITLTALEDTSYSIIRTDELIGKLEDQHLLPTFFLQIAEDFEKGLDWQR-TLISVDPAERAEMILVKIIERYEINSENKPEFPRWLRINVLARFAKCSVSTMSSVVNELVNEGDLNIKGTPWLLTRPYQASCA
3DKW Chain:A ((31-224))
------------------------SSDLVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAEAMMFMDTPNYVATAQAVVPSQLFRFSNKAYLRQLQDNTPLALALLAKLSTRLHQRIDEIETLSLKNATHRVVRYLLTLAAHAP---GENCRVEIPVAKQLVAGHLSIQPETFSRIMHRLGDEGIIHLDGREISILDRERLE--
General information:
TITO was launched using:
RESULT:
Template:
3DKW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78585 for 1077 contacts (-73.0/contact) +
2D Compatibility (PS) -19064 + (NN) -2779 + (LL) 3024
1D Compatibility (HY) -4400 + (ID) 1150
Total energy: -102954.0 ( -95.59 by residue)
QMean score : 0.433
(partial model without unconserved sides chains):
PDB file :
Tito_3DKW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DKW-query.scw
PDB file :
Tito_Scwrl_3DKW.pdb
: