Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAEKIELSKRDRLRVAWRSTFIQGSWNYERMQNGGWAFSMIPAIKKLYKTKEDRSQALKRHLEFFNTHPYIASPILGVTLALEEERANGAEVDDVAIQGVKVGMMGPLAGVGDPVFWFTIRP-MLGALGASLALSGNILGPILFFVAWNVIRWGFMWYTQEFGYKAGSKITDDLSGGLLQDITKGASILGMFVLAALVQRWVNIQFAPIISKVKLDEGAYIDWSHLPQGAQGIKTALEQQQAGLALSEIKVTTLQNNLDNLIPGLAAVALTFLCMWLLKKKISPIIIILGLFVVGIVGHLIGLL |
3M6E Chain:A ((45-139)) | ---------------------------------------------------------------FYNSTTLGVCAVLGTAASTLTAQLLG--VDKPLVRAGLFGANGTLAGIALP-FFFNYEPAMLGYVALNGAFTTIIMASLLNFLG----KWGVPALTAPF---------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3M6E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37306 for 669 contacts (-55.8/contact) +
2D Compatibility (PS) -9187 + (NN) 4181 + (LL) 17492
1D Compatibility (HY) -6400 + (ID) 1350
Total energy: -32570.0 ( -48.68 by residue)
QMean score : 0.122
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