Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VTIKITRKTGIGSGITPVKIRIENEEIVKLDNHQSHFFMPKMEKTKVCVTDWFYGSQEAVLENSNDVVVRINRKALLLNYSMFPFLFYGFVMTSLFATLIALGLCLVSFFYSRKHWFEFVKIK |
2B39 Chain:A ((30-95)) | ---------------TPNILRLESEETVVLEAHGGQ------GTIQVSVTVHDFPAKKQVLSNEN---------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B39.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2855 for 167 contacts (17.1/contact) +
2D Compatibility (PS) -4604 + (NN) 877 + (LL) 7300
1D Compatibility (HY) -1600 + (ID) 800
Total energy: 4028.0 ( 24.12 by residue)
QMean score : 0.134
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