Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYFVYDIGGTFVKFALMENNGTVKMKDKFPTTAKSAE---ELVAQMVEKW-RPYRTEVKGIAVSCPGVVDTEKGVIYQGGSLLFMHEKNLAEMLARECHVPVVLQNDAKSAALAELWLGVAKNVHSAAILTLGSGVGGGIIMDGKLQSGYHLMAGEVSFMETSF-------DTKKLRGTFFGRTGSAVELIK----RIASKKNLPNKKDGEHVFELINQGDEEANAIFDAYIYELASQILNIQYLIDPEIIAIGGGISAQPVVVERLNDAVAEIKAANPYHAAQPKIVTCHFQNDANLYGALYNFFLQMDAQNKR |
4DB3 Chain:A ((25-322)) | MYYGFDVGGTKIEFGAFNEKLERVATERVPTPTDDYPLLLETIAGLVAKYDQEFACEGK-IGLGLPGMEDADDATVLTV-NVPAAKGKPLRADLEAKIGRSVKIENDANCFALSEAWDEELQDAPSVMGLILGTGFGGGLIYEGKVFSGRNNVAGELGHMRLPLDAWFHLGDNAPLLGCGCGKKGCLDSYLSGRGFELLYAHYYGEEKKAIDIIKANAAGDEKAAEHVERFMELLAICFGNIFTANDPHVVALGGGLSNFELIYEEMPKRVPKYLLS---VAKCPKIIKAKHGDSGGVRGAAF------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DB3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176971 for 2298 contacts (-77.0/contact) +
2D Compatibility (PS) -30444 + (NN) -11953 + (LL) 488
1D Compatibility (HY) -12000 + (ID) 3800
Total energy: -234680.0 ( -102.12 by residue)
QMean score : 0.496
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