Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LYEKLVNKYQDEVTIREEKMPYKLPGLYLNGMIFISKDQSSIEKGCVLVEELMHYKYTVGNITKQETIMDKKQEIFARRKGYEELIPLDDIIACFYLGLREYFEVAEFLEVTEEFLRHTVSHYAEKYGPMYDYGGYFINFGNSIDVYKKF
1UIS Chain:A ((96-161))
---------------------------YEDGGVFTVMQDTSLEDGCLVY----HAKVTGVNFPSNGAVMQKKT------KGWE---PNTEMLYPADGGLRGYSQMA--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1UIS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3744 for 290 contacts (-12.9/contact) +
2D Compatibility (PS) -6871 + (NN) 2476 + (LL) 6680
1D Compatibility (HY) -2800 + (ID) 1150
Total energy: -5409.0 ( -18.65 by residue)
QMean score : 0.026
(partial model without unconserved sides chains):
PDB file :
Tito_1UIS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UIS-query.scw
PDB file :
Tito_Scwrl_1UIS.pdb
: