Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAFEENLYCDYTPGAAKAVAGKDVILAVFNAAGDKLLAVAGQQGLTVNRSKDSIEITSKDTVGGWKSKIGGMKEWSIENDGLYVAD-AESHKELAKYFESDSPVCVKIINQASKKGLFGGLAIVADYSFEAPFDEAMTYSVKLDGMGALVDLTITEGGDQMPGETPVAPAE |
9RUB Chain:A ((412-439)) | ------------------------------------------------------------------------QAWQAWRDGVPVLDYAREHKELARAFES----------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 9RUB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -248 for 133 contacts (-1.9/contact) +
2D Compatibility (PS) -3018 + (NN) -1525 + (LL) 8012
1D Compatibility (HY) -800 + (ID) 700
Total energy: 1721.0 ( 12.94 by residue)
QMean score : 0.318
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