Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VDSEMNHDFDLEKQFAFFVVNFRMSKHDF--------EELTEVEKNFIMKEWENKVIFESTMLRNAVLNAEQNLNRKRNSRFIDLHKKRQKKADVNYTVNALQAISENEAKEGKAWIDRIYGANGLRRPKNKEERRNVNGGF |
4PA1 Chain:A ((73-135)) | ------------------VLNYMGVKHKFGIPGNPQSQALVE-NVNHTLKVWIQKFLPETTSLDNALSLAVHSLNFKRRGRI------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PA1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5073 for 247 contacts (20.5/contact) +
2D Compatibility (PS) -5579 + (NN) 153 + (LL) 4948
1D Compatibility (HY) -2800 + (ID) 1100
Total energy: 695.0 ( 2.81 by residue)
QMean score : 0.305
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