Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKVNKFFKKTTHVLLVAGLTIGLTAPFTGTTAQAAADTVPIQILGINDFHGALETASKDASGS-----PIGGADYLATNLDNATNSFLQANPGATTDNAIRVQAGDMVGASPAVSGLLQDEPTMKVLQKMNFEVGTLGNHEFD---EGLPEYKRILDGVSTNKFGPIVEAYPRVKSDMKIVAANVVNKG--TNTVAEGFLPYYVKEIDGVKVGFIGIVTTEIPNLVLANHIKDYDFLDEAETIVKYSAELRGQGVNAIVVLSHV------------------------PALSTGNPNTGTKQDVAGEAANMMTKANELDPNNSVDLVLAGHNHQYTNGLVGKTRIVQSYNNGKAFSDVTGELDKTTGDFVSPPDAKITYNTRSVTPNADITAVTEDAKSRIEGVINETIGLANKDVISRDTNPDNKAIDDKESELGNMITDAQ-----RYMANKAGADVDFAMTNNGGIRSDLTTRLANGQNEITWGAAQAVQPFGNILQVVEMTGADILEALNQ---QYLSNQTYFLQISGLKYTFTDTDD-------LDHAYKVASVTTEDGTPLKTDQKYKVVINDFLFGGGDGFSAFKKANLVT-AIDPDTETFINYIKDQKAAGKVITAQKEGRKVYKSQAEIDKETKDAAIKAIKEATKINKLAEKDKTLTGTTLPGATVSVQKATANARMALAAGPNATADANGKFSVDVTSLNLKKGDQITTTITDPNGYSTTFQATVQAAATTPPDNGNGGTDNGNGNGNNGGTDGNGGTNNGNGSGTNGGTTTTEDPTTTTSNTSTTGTSSNTSLPTTGDTAGLATVFGVILTTTALYVLRKRS |
| 4H2G Chain:A ((23-542)) | -------------------------------------PWELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIR----RAEP-----NVLLLDAGDQYQGTIWFT-VYKGAEVAHFMNALRYDAMALGNHEFDNGVEGLIE--------------PLLK-----EAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYTSKETP--FLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFEMDKLIAQKVRGVDVVVGGHSNTFLYTGNPPS--KEVPAGKYPFIVTSDDG-----------------------RKVPVVQAYAFGKYLGYLKIEFDER-GNVISSHGNPILLDS-SIPEDPSIKADINKWRIKLDDYSTQELG---KTIVYLDGS--SQSCRFRECNMGNLICDAMINNNLRHADEMFWNHVSMCILNGGGIRSPIDER---NDGTITWENLAAVLPFGGTFDLVQLKGSTLKKAFEHSVHRYGQSTGEFLQVGGIHVVYDLSRKPGDRVVKLDVLCTACAVPSYD--PLKMDEVYKVILPNFLANGGDGFQMIKDELLRHDSGDQDINVVSTYISKM----KVIYPAVEGR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4H2G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113928 for 3957 contacts (-28.8/contact) +
2D Compatibility (PS) -50950 + (NN) -19843 + (LL) 10716
1D Compatibility (HY) -32800 + (ID) 7200
Total energy: -214005.0 ( -54.08 by residue)
QMean score : 0.430
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