Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKTIIKRVLQIIPMLFIISIISFALIKLAPGDPVNSFVTPDMNPDDVERIRQSLGLDQPIYVQYFIWLGNLLQGNLGYSIVNSQPVLQQILERIPATLGLVGTSLVLTLLLSIPLGLVAANYENTWIDKVLNGISYIGISIPIFWFGMILIDVFSIQLGWLPSLGMRTIGVDSFWDMAEHAILPVITLTFQGCAAYYRYVRSNTINQLKEEYVLFGYAKGLSKVQIMGHHVLKNSLLPVITLLGMSLPQVIT--GAFITESIFSWPGMGSLGINAIFQLDYPVIMAITLFSALLLIIGNLLADLAYMIVDPRIREMG |
3VKK Chain:A ((95-138)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KGIDYYNKIIDDLLKNGVTPIVTLYHFDLPQTLEDQGGWLSEAI------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VKK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12966 for 159 contacts (-81.5/contact) +
2D Compatibility (PS) -4377 + (NN) -26 + (LL) 22040
1D Compatibility (HY) -5200 + (ID) 700
Total energy: -1229.0 ( -7.73 by residue)
QMean score : 0.032
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