Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYEKVEKIINDWDPIELFPLAPKDEYSQEINKIISIVQENPNIDMNVLGKGIRKIFIDSFGENLIFKNNEDEIAEKILAL
4C02 Chain:A ((254-288))
-------IVEDYKP-PFYDVVPNDPSFEDMRKVVCVDQQRPNI-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4C02.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2505 for 161 contacts (15.6/contact) +
2D Compatibility (PS) -3626 + (NN) -3554 + (LL) 3724
1D Compatibility (HY) -3600 + (ID) 500
Total energy: -5051.0 ( -31.37 by residue)
QMean score : 0.297
(partial model without unconserved sides chains):
PDB file :
Tito_4C02.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4C02-query.scw
PDB file :
Tito_Scwrl_4C02.pdb
: