Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKWSFLVVTVLAFVLVLAGCGASNDKVSGDKDKLKVVTTFYPMYDFTKNVAGDNASIEMLIDAGTEPHDYEPSAKDIAKIEAADVFVYNSEDMETWVPSVLKSLDSKKLTVIDASKGIEL--VEGTEEEDHDHEHEEGHHHE--HDPHVWLSPVLAEQEVTNIQNGLTKADKTNADTYKKNAETYKEKLKTLDNKFKTAFEGAKQRDFVTQHAAFQYLAKEYDLHQVAIAGLSPDQEPSPARLAELQKYVKENNISTIYFEEVASPKVAETLANETGAKLEVLSPIEGITDKEQKKGMDYIAYMEQNLQALQKTIK |
3HJT Chain:A ((14-287)) | ----------------------------------MSVVTSFYPMYAMTKEVSGDLNDVRM-IQSGAGIHSFEPSVNDVAAIYDADLFVYHSHTLEAWARDLDP---KSKVNVFEASKPLTLDRVKG-----------------TLYDPHTWTDPVLAGEEAVNIAKELGHLDPKHKDSYTKKAKAFKKEAEQLTEEYTQKFKKVRSKTFVTQHTAFSYLAKRFGLKQLGISGISPEQEPSPRQLKEIQDFVKEYNVKTIFAEDNVNPKIAHAIAKSTGAKVKTLSPLEAAPSGNKT----YLENLRANLEVLYQQLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HJT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73618 for 2136 contacts (-34.5/contact) +
2D Compatibility (PS) -28006 + (NN) -13915 + (LL) 3428
1D Compatibility (HY) -22000 + (ID) 5400
Total energy: -139511.0 ( -65.31 by residue)
QMean score : 0.577
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