Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYKIIAIDIDGTLLNDTHEITPAVRDSIKAAKAKGVKVVLCTGRPLAGIKKSLIELDLLDEGDYAITFNGAVVLETASEKTLADITLNKTELEEIYAFCHAENVNVTYFDGKNMYVPS--RKITEITCQDSLLLGTPLYHLPVEEAPESIHVSK-----------VMLLDSPEKITDVI------KKLPENIK-----EKFYVVRSVPYNLEFLQKGVNKGSALASLADKLGVDQSEVMSIGDQENDITMIEYAGMGVAMGNATEHIKEIANYTTTTNNEDGVAQAIQMLILDR |
| 1NRW Chain:A ((5-288)) | --KLIAIDLDGTLLNSKHQVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGI---KTWVISANGAVIHDPEG-RLYHHETIDKKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVEL-DRFRSANPEADLSVLKQAAEVQYSQSGFAYINSFQELFEADEPIDFYNILGFSFFKEKLEAGWKRYEHAEDLTLVSSAEHNFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMKHLL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NRW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125702 for 2265 contacts (-55.5/contact) +
2D Compatibility (PS) -28586 + (NN) -7550 + (LL) 928
1D Compatibility (HY) -16000 + (ID) 4300
Total energy: -181210.0 ( -80.00 by residue)
QMean score : 0.458
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