Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDILRKGNKDLIKDINRYTVLNLIREKGEITRTEIAKKCDFGMSTLTYILDDLQQEGIILEGAETSSTGGRRAKLVRFNKDYGFVVSVKVEEEQLLFALTDLNAEIIENTSIPFSSEKKPEEAIELI--------AKNVKKMCGNRDMNHLLGVGIAISGLVNRKKGTVIRSTML--GWENVALEAMLHAHFPDIPVYVDKNINCYTLAELWLGEGKQSNNFATVSVGAGLGLSVVINRQIYYGAQGGAGEFGHTTIQPGGYKCHCGQKGCLEMYASEFYFRNRGEELKE---------AYPTSE-LNDFHFDKVAKSARAGDEMATELMGKMGEYLGYGIRNIINTFNPEKVIIVGEGLHHRDLFLTKIDEIASQNFFSGAGFETEITTTSLEDPAWLQGAALLVIHQLFQVPIYEEEQTLLR |
| 2YI1 Chain:A ((33-292)) | -------------------------------------------------------------------------------------LAVDLGGTNLRVAIVSMKGEIVKKYT-QFNP-KTYEERINLILQMCVEAAAEAVKLNC------RILGVGISTGGRVNPREGIVLHSTKLIQEWNSVDLRTPLSDTL-HLPVWVDNDGNCAALAERKFGQGKGLENFVTLITGTGIGGGIIHQHELIHGSSFCAAELGHLVVSLDGPDCSCGSHGCIEAYASGMALQREAKKLHDEDLLLVEGMS-----AVGALHL---IQAAKLGNAKAQSILRTAGTALGLGVVNILHTMNPSLVILSG------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YI1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119095 for 1867 contacts (-63.8/contact) +
2D Compatibility (PS) -25316 + (NN) -8336 + (LL) 11600
1D Compatibility (HY) -18000 + (ID) 4150
Total energy: -163297.0 ( -87.46 by residue)
QMean score : 0.426
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