Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKFTKLMQGYLHLIEGKNEKIKPILLETKPNFTTDSVLETASWLWLSSKINHYDREEVEPVIAFLVENWNRPEKSIWGSAENDIYLATISSVYSALLDVKNTFPKPELQQTITIIRDYCFDNLLKGDSILTGFNTRKVSTDQLLSVLPFGLFSPEDLVMVAAVGKMEQQLVQDDGVLPYSGAPRVNSFATALMALYFLEKSDQDKALHYLNMAMKMEDNDELGAIFIEINQAFRAMESEVTAHISHDPFGHENRYEQQLTERTPHYPETEMHFSAACEVISEVEPIQVELVLKEKDWTILCEKKEKNDVQIWEALVPPLEEVGEYTYYFQATMKDQTTLTSDDYKVEPIWKHWSEEAAICETEQGLMVLFKENPSSIIPVEFTVKSDELVIGLKPSFEASNVKTKSSGQLKKDDLEIIVSNNPVRLEVHFKGKLILESHKIYPALQWYTDKTGTINKVKLHLDAPKEEEYYGFGERYNALGQRGNVLDCFVYNQYRDQGTRT---YIPMPFYHTNRDYSVFVDTARYTSFDLGNQLADKHTITVEINGCDTDICLLMGDIRSAVAN-YMKKTGKPAMVPVWALGPWMSSN---NWDRESVVRNEVETTQELQIPSTVVVLE-------QWSDEATYYMFNDAEYDEKAPSEAYSYDEIRFPSWGRWPDPKGMVDYIHDNKMKLILWQIPIQKYLNRQQHPLKDREEAYMIEKGYVVKNPDGSPYRIPENWFTESLIMDFSNEEGKKWWFDKRQYLIDIGVDGFKTDGGEFVFGEGLQFADGRRGDEMRNLYPNDYVEAYYQFAQ----QNEGMTFSRAGYTGAQNFPAHWAGDERSTFDAFRRSLIAGLSAGFSGIPFWSFDFAGFNGDIPTAELFIRSAEMATFCPIMQYHAESKAEFNQDRTPWNIASRTGDDSVIPIYRHFANVRMNILPYIYNESLKCVETGLPMMRALLLDYKEDPRVSDMYDQYLFGEAMLIAPVIEDGVRSREVYLPEGTWYDFWNGTKVSGPTLRKCKADKEEIPVFVRGGKAVLCNVDATLKLGSWVGNTVEEYDTPLLKVYLDGDFTEEITDHLFGKWLVKVTENADEVIVSVQTNTASYEVEVIGTTKKVQIKKGR |
| 1XSJ Chain:A ((154-664)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LDLGVGETVYGLGERFTALVRNGQTVETW----NRDGGTSTEQAYKNIPFYMTNRGYGVLVNHPQCVSFEVGSEKVSKVQFSVESE--YLEYFVIDGPTPKAVLDRYTRFTGRPALPPAWSFGLWLTTSFTTNYD-EATVNSFIDGMAERNLPLHVFHFDCFWMKAFQWCD--------------------FEWDPLTFP------DPEGMIRRLKAKGLKICVW---INPYIGQKSPVFKELQE-----KGYLLKRPDGSLWQW-DKWQPGLAIYDFTNPDACKWYADKLKGLVAMGVDCFKTDFGERIPTD-VQWFDGSDPQKMHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYANYESMAESLRGGLSIGLSGFGFWSHDIGGFENTAP-AHVYKRWCAFGLLSSHSRLHGSKSY-----RVPWAY-----DDESCDVVRFFTQLKCRMMPYLYREAARANARGTPMMRAMMMEFPDDPACDYLDRQYMLGDNVMVAPVFTE-AGDVQFYLPEGRWTHLWHNDELDGSRWHKQQHGFLSLPVYVR------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XSJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -208511 for 4379 contacts (-47.6/contact) +
2D Compatibility (PS) -52211 + (NN) -14292 + (LL) 42836
1D Compatibility (HY) -40400 + (ID) 8500
Total energy: -281078.0 ( -64.19 by residue)
QMean score : 0.461
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