Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKISITAPAKINLSLDALYKREDGYHEVEMVMTTIDLADRLYLERLDEDKI-VLDVKAHFIPEDRRNLIYQAALLLKKRFDVKMGVRITIDKHIPVSAGLAGGSSDAAAALKGLNVIWELGLSIEELAEISSEIGSDIAFCVYGGTALATGRGEKISALPNIPGCWIVLAKPSISVSTPTIYKEL-QVDNVEHP----DTQKMIESIKNGDLDGIFAATGNVLESVTLEKNPQVKRIKDRMLAFGAEAALMSGSGPTVFALIKQYSRAKRVYNGLR--GFCEEVYMVRPWSEGENDTNINY |
| 3PYD Chain:A ((5-287)) | -SVTVRVPGKVNLYLAVGDRREDGYHELTTVFHAVSLVDEVTVRNADVLSLELVGEGADQLPTDERNLAWQAAELMAEHVGRAPDVSIMIDKSIPVAGGMAGGSADAAAVLVAMNSLWELNVPRRDLRMLAARLGSDVPFALHGGTALGTGRGEELATVLSRNTFHWVLAFADSGLLTSAVYNELDRLREVGDPPRLGEPGPVLAALAAGDPDQLAPLLGNEMQAAAVSLDPALARALRAGVEAGALAGIVSGSGPTCAFLCTSASSAIDVGAQLSGAGVCRTV----------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PYD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -150856 for 2368 contacts (-63.7/contact) +
2D Compatibility (PS) -29663 + (NN) -5697 + (LL) 856
1D Compatibility (HY) -17200 + (ID) 4800
Total energy: -207360.0 ( -87.57 by residue)
QMean score : 0.486
|
|
|