Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYIKGRLIFFFVVLVIALCSVLILLIIKISVWKDEPFHLSDAKEIECLGSCEIKNTNQKIHFFSIKENLFEEKGD------IAGILNEDEQKVADKSIFIVILDDEKGIANEE
1X9Y Chain:A ((122-180))
-----------------------------------------------------------------KDDLNKSKEDMNYSVKISNFIAKDLDQIKDKNSNITVLTDEKGFYFEE
General information:
TITO was launched using:
RESULT:
Template:
1X9Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3399 for 155 contacts (21.9/contact) +
2D Compatibility (PS) -4445 + (NN) -590 + (LL) 6540
1D Compatibility (HY) -2000 + (ID) 800
Total energy: 2104.0 ( 13.57 by residue)
QMean score : 0.319
(partial model without unconserved sides chains):
PDB file :
Tito_1X9Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X9Y-query.scw
PDB file :
Tito_Scwrl_1X9Y.pdb
: