Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNVFEPRLSSWLENAGDDDDVVLSSRIRLARNLKDEQF-PI-----YEQKEEIVDNIAEVFDDNF--ILIKMNQISLLQKALLVEKHLISP------YMMNKSEYG----AVLLNEEENVSIMLNEEDHLRIQCMTPGLRLFDALEAALQIDGYVEEKLSYAFDKEFGYLTSCVTNIGTGMRASVMVHLPGLVTTKRIKSVIEAIRS-LGFVVRGIYGEGSMPASNIFQVSNQVTLGKTEAEIVEDLTQVMEQIIMQERVARTTLKQKFHIALEDRVFRSYGLLMNCRIISMKEAADAISDIRFGVELGFFEHISRQKMNELVLFSQPAFLRREAGRDMDELEEKVIRAKVIREILGDK |
| 4GVY Chain:A ((120-356)) | ---------------------IISTRVRCGRSLQGYPFNPCLTAEQYKEMEEKVSSTLSSMEDELKGTYYPLTGMSKATQQQLIDDHFLFKEGDRFLQTANACRYWPTGRGIFHNDAKTFLVWVNEEDHLRIISMQKGGDLKTVYKRLVTAVDNIESKLPFSHDDRFGFLTFCPTNLGTTMRASVHIQLPKLAKDRK---VLEDIASKFNLQVRGTRGEHTESEGGVYDISNKRRLGLTEYQAVREMQDGILEMIKMEKAA-------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GVY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135226 for 1648 contacts (-82.1/contact) +
2D Compatibility (PS) -24044 + (NN) -8986 + (LL) 9944
1D Compatibility (HY) -12400 + (ID) 3450
Total energy: -174162.0 ( -105.68 by residue)
QMean score : 0.462
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