Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LSIQIFNTLKREKQPFKPLKDGE-VKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGYDVKFVSNFTDV---DDKLIRAANELKLTVPEVADRFIGAYFDDVDQLNVAKASVNPRVTENMDEIIQMISTLIEKGYAYESAGDVYFQTKKFKDYGKLSGQELSELQHGARVEYNERKQDELDFTLW---KAAKPGEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLVFPHHEDEIAQSEAATGKTFANYWMHNAFLNIDGEKMSKSLGNFITLHDVLKDN-DPNVIRFFMLSVHYRKPITLNDAILEDAK----NGLERLMIAYQNID-------HRIQTDDGEYVEEAHEDEWLEQLTELKQAFEDDMDDDFNTANAITTFHELAKRANIYLAKETVSINVLREFLSMMRL---FAEVLGLK-----LENTQT-DSLDDSEVEALIEERLQARNERNFARADEIRDILKEKNIILEDTAQGTRFRRG |
| 3SP1 Chain:A ((22-490)) | MILKLYNTRTKD---FSELTNFENVKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFLGYKVNYAMNITDIGHL------------LTVYEISEFFTEAFFNDCRKLNIVYPDKVLVASKHIPIMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAG----------------FKRNKTDFVLWFTNSK-----MKWDSPWGFGYPSWHLECAAMNLEYFKDALDIHLGGVDHIGVHHINEIAIAECFLNKKWCDVFVHGEFLIMD----------FITVKDLEDQNFSPLDFRYLCLTSHYRNQLKFSLDNLQASKIARENLINKLSYFYESLDPVDLNTLNKDLKNFGFSVEKEYYDSFVEKISF-----------DLNVAQGLALLWEIIKSDNL-------------SFVSKLRLAFIFDEIMSLNLREEILKNLQNHDVVIDENMKALIEERRIAKCEKNFKRADEIRDFFAKKGFVLV----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SP1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173830 for 3015 contacts (-57.7/contact) +
2D Compatibility (PS) -41643 + (NN) -13051 + (LL) 4836
1D Compatibility (HY) -38000 + (ID) 7450
Total energy: -269138.0 ( -89.27 by residue)
QMean score : 0.462
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