Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKNWYVVHTYSGYENKVKANLEKRVESMGMSDKIFRVIVPEEEETEVKNGKTKTIKRKVFPGYVLVEIVMTDDSWYVVRNTPGVTGFVGSAGSGSKPTPLLPEEADRILKSMGMVEKRAEADFEIGETVMVKEGPFADFSGKVDEMDNDKGKAKVMVNMFGRETPVEVDFNQIEKL
2K06 Chain:A ((6-118))
-KKRWYVVQAFSGFEGRVATSLREHIKLHNMEDLFGEVMVPTEEVVEIRGGQRRKSERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIG--GTSDRPAPISDKEVDAIMNRLQQV-------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2K06.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43806 for 748 contacts (-58.6/contact) +
2D Compatibility (PS) -12672 + (NN) -7929 + (LL) 4264
1D Compatibility (HY) -11600 + (ID) 2350
Total energy: -74093.0 ( -99.05 by residue)
QMean score : 0.602
(partial model without unconserved sides chains):
PDB file :
Tito_2K06.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K06-query.scw
PDB file :
Tito_Scwrl_2K06.pdb
: