Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDKAKQIYLEFKREADFLELDFPLFLGDGPGFGELCMDYSEQDGYMLYGYEHGKRNSEFKTTDFDEFKYEVFLHICWYMGMEFELRHRKEDIERDDNILETDTRKIAFEKTLQLLKMVNPAWIDKAAIGYSNYLNLWRKNKNVYFDKEAMQFKVNL |
| 2YK0 Chain:A ((396-419)) | ----------------------------------------------------------------------------------------------------------------------------KQNLKYSMEIQKWKKTKNNYYDKE-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YK0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3540 for 88 contacts (40.2/contact) +
2D Compatibility (PS) -2496 + (NN) -1010 + (LL) 9668
1D Compatibility (HY) -1200 + (ID) 550
Total energy: 7952.0 ( 90.36 by residue)
QMean score : 0.154
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