Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKKLVSIIFLGICLLLVGCGKEVVDSKYTGKWKLESSGIGMSDGSNYKETDAAGKVSLDLDIDAEGNVKELYIDDAVAITNSYKLKKKGDDEYQYDGTLISKKVYSYETESDKENVETMLKFLKSKDNVKITKNEQKGDEYHIDVKADEK----------DFVFSL----------EMQSGKLI--FKKVDT-KEKVLIKETYKKN |
| 1IFC Chain:A ((2-107)) | -----------------------------------------------------------------------------------------------FDGTWKVDRNENYEKFMEKMGINVVKRKLGAHDNLKLTIT-QEGNKFTVKESSNFRNIDVVFELGVDFAYSLADGTELTGTWTMEGNKLVGKFKRVDNGKELIAVRE----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IFC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13438 for 406 contacts (33.1/contact) +
2D Compatibility (PS) -8888 + (NN) 2271 + (LL) 5584
1D Compatibility (HY) -4800 + (ID) 1350
Total energy: 6255.0 ( 15.41 by residue)
QMean score : 0.211
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