Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LRKSRWLLILLLLIVLVALSACEDSGNGDISGAPAKMEKQHFPPTDT----KKGWI---ELLATDGISSQDNLPCVY----EEAESVEKLEVHMKELSTASLTYIYIDGHIVQMEQGGDELSFQIQLSKTELRKGIHELAVVQYQENNPETKKVEFLKRANYEVKQIKND |
| 4J2X Chain:A ((42-109)) | -------------------------------------EKRFFCPPPCVYLMGSGWKKKKEQMETDGCSEQESQPCAFIGIGNSDQEMQQLNLEGKNYCTAKTLYI----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J2X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -778 for 236 contacts (-3.3/contact) +
2D Compatibility (PS) -5981 + (NN) 208 + (LL) 7984
1D Compatibility (HY) -2400 + (ID) 1000
Total energy: -1967.0 ( -8.33 by residue)
QMean score : 0.220
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