Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKVRNKVKQLREERGIGQNELALALEVSRQTIHAIEKGKYNPSLELSLKMARYFRLTIEEIFQLEEN
2GZU Chain:A ((2-64))
--IINNLKLIREKKKISQSELAALLEVSRQTINGIEKNKYNPSLQLALKIAYYLNTPLEDIFQWQ--
General information:
TITO was launched using:
RESULT:
Template:
2GZU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34079 for 435 contacts (-78.3/contact) +
2D Compatibility (PS) -6822 + (NN) -2687 + (LL) 264
1D Compatibility (HY) -7200 + (ID) 1750
Total energy: -52274.0 ( -120.17 by residue)
QMean score : 0.642
(partial model without unconserved sides chains):
PDB file :
Tito_2GZU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GZU-query.scw
PDB file :
Tito_Scwrl_2GZU.pdb
: