Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRKIIAVTACATGVAHTYMAAQALKKGAKKMGNLIKVETQGATGIENELTEKDVNIGEVVIFAVDTKVRNKERFDGKVVLEVPVSAPIKDAEKVINAALALIDEK
2KYR Chain:A ((1-96))
MSKKLIALCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGADGIQNRLTAQDIAEATIIIHSVAVTPEDNERFESRDVYEITLQDAIKNAAGII----------
General information:
TITO was launched using:
RESULT:
Template:
2KYR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53082 for 796 contacts (-66.7/contact) +
2D Compatibility (PS) -9934 + (NN) -1468 + (LL) 1000
1D Compatibility (HY) -8000 + (ID) 2050
Total energy: -73534.0 ( -92.38 by residue)
QMean score : 0.553
(partial model without unconserved sides chains):
PDB file :
Tito_2KYR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KYR-query.scw
PDB file :
Tito_Scwrl_2KYR.pdb
: