Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYLVTGATGGLGGYALNYLKELVPMSDIYALVRSKEKGADLKAAGFNIRVGDYSDAESMKQAFAGIDRVLFVSGAPGNRQ---VEHENVINAAKKAGVSYIAYTSFAGADKSTSALAEDHFFTEKVIEKSGIAHTFLRNNWY---FENEMPMIGGALSAGKFVYAAENGKVGWALKREYAEVAAKAVAGAGFPEILE--LSGPLMTYEELTKALKEATGKDF---DVISSDDKGFVENLVSVGLPQPVAEMFLSFQHDIKNDQLDVTSDDFEKALGKPLTNRVDALRELLK |
| 2JL1 Chain:A ((5-286)) | ----VTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAFAEESIIPLAHVHLATEYAIRTTNIPYTFLRNALYTDFFVNE--GLRASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQILSEVSGKKVVHQPVSFEEEKNF---LVNAGVPEPFTEITAAIYDAISKGEASKTSDDLQKLIGS-LTPLKETVKQALK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2JL1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -124806 for 2192 contacts (-56.9/contact) +
2D Compatibility (PS) -29676 + (NN) -14967 + (LL) 672
1D Compatibility (HY) -15200 + (ID) 5250
Total energy: -189227.0 ( -86.33 by residue)
QMean score : 0.643
|
|
|