Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIEKTIMERRSIKKANDEPISRETVNTILEQAAYAPFHSKVEPWNVYVLHTLAEKERYIEKIIEFNEREQGVSFSEAEIADLKAGYAKK--IITPPYLLIVTTNIIGHGK-KDFESIGATSAFIQNIQLLGWEAGIGMIWRSNRFIFDAKFADDLGIPAEQKIVGTLHLTSLAEVPEAKPRRPLNEWVKNLADL
3K6H Chain:A ((32-196))
--------------------SKGEIEEILRLAVRVPDHGKLAPWR-FVVYRGEERVRLSEAALR-------IALEKNPDLDLQQQEAERTRFTRAPVVIAVISTAKPHFKIPEWEQVMSAGAVCLNVIFAANASGFAANWLTEWLAFDPAFLAEIGVSAEEKVAGYIHIGSTTFPPVERPRPELADVVTWVGD-
General information:
TITO was launched using:
RESULT:
Template:
3K6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76670 for 1084 contacts (-70.7/contact) +
2D Compatibility (PS) -17300 + (NN) -6154 + (LL) 2484
1D Compatibility (HY) -7600 + (ID) 2050
Total energy: -107290.0 ( -98.98 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_3K6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3K6H-query.scw
PDB file :
Tito_Scwrl_3K6H.pdb
: