Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLLKNINELAAKQKSEGLTAFEKERQAALRQEYLK----KIRGTVQDNLHHVTIIDPLGDDVTPKKLKEIQAELRG
3FFY Chain:A ((55-107))
---LLKTLTQFAEY--------FGPERQVSVSREISKIHEETVRGTLSELIEHFTATDPRGEIV--------------
General information:
TITO was launched using:
RESULT:
Template:
3FFY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1232 for 282 contacts (4.4/contact) +
2D Compatibility (PS) -4834 + (NN) 798 + (LL) 1968
1D Compatibility (HY) -3200 + (ID) 950
Total energy: -4986.0 ( -17.68 by residue)
QMean score : 0.205
(partial model without unconserved sides chains):
PDB file :
Tito_3FFY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FFY-query.scw
PDB file :
Tito_Scwrl_3FFY.pdb
: