Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LDKQAILNNIHQTWQEEANAISRLPEVTSEEALVKTVEKIAECTGKIVVAGCGTS---GVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNMLATASTMAVIASFDAVIVCLMTYMNYTKEQFSVIHPGGAVGNKLLNK
2V4M Chain:A ((55-182))
------------------------------------IKEIQRCRRLILIA-CGTSYHAGVATRQVLEELT--ELPVMVELASDFLDRNTPVF-RDDVCFFLSQSGETADTLMGLRYCKERGALTVGITNTVGSSISRETDCGVHINAGPE------IGVASTKAYTSQFVSLVM-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
2V4M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84982 for 1007 contacts (-84.4/contact) +
2D Compatibility (PS) -12930 + (NN) -3257 + (LL) 5028
1D Compatibility (HY) -10400 + (ID) 1800
Total energy: -108341.0 ( -107.59 by residue)
QMean score : 0.484
(partial model without unconserved sides chains):
PDB file :
Tito_2V4M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2V4M-query.scw
PDB file :
Tito_Scwrl_2V4M.pdb
: