Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQILFIQTGFGVDVHGQNITKAAERAVRNAIFTNSMPGIQGLLPDGDLQNMVVNIKLALPCDA----DQLDE--DTIRAIIPYGTVTIEKMAGGMMTTSGIFLEDKEDKNDLMYIVNASVETGY
2E0N Chain:A ((118-182))
------------------------ERARRDGLDCSMTPGIPAFIAAGSAAGM----PLALQSDSVLVLAQIDEIGELERALVTHSTVVVMKLS--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2E0N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2925 for 245 contacts (-11.9/contact) +
2D Compatibility (PS) -5793 + (NN) 4410 + (LL) 4136
1D Compatibility (HY) -2400 + (ID) 1050
Total energy: -3622.0 ( -14.78 by residue)
QMean score : -0.131
(partial model without unconserved sides chains):
PDB file :
Tito_2E0N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E0N-query.scw
PDB file :
Tito_Scwrl_2E0N.pdb
: